Publications

The documents distributed here have been provided as a means to ensure timely dissemination of scholarly and technical work on a noncommercial basis. Copyright and all rights therein are maintained by the authors or by other copyright holders, notwithstanding that they have offered their works here electronically. It is understood that all persons copying this information will adhere to the terms and constraints invoked by each author's copyright. These works may not be reposted without the explicit permission of the copyright holder.


[In Review]  [Journal]  [Conference]  [Patent]  [Presentations] [Book Chapter] 


In Review (Journal):

[XX]. R.Z. Rusho, A.H. Ahmed, S.J. Kruger, W. Alam, D. Meyer, D. Howard, B. Story, M. Jacob, S.G. Lingala
"Prospectively accelerated dynamic speech MRI at 3 Tesla using a self-navigated spiral based manifold regularized scheme"
NMR in Biomedicine (in review) [arxiv]

 

[XX] J.D. Herman, R. E. Roca, A. G. O. Neill, M. L. Wong, S. G. Lingala, A. R. Pineda
"Task-based assessment for neural networks: evaluating undersampled MRI reconstructions based on human observer signal detection"
Magnetic Resonance Imaging, (in review) [arxiv]



Journal:

 

[31]. S. Erattakulangara, K. Kelat, D. Meyer, S. Priya, S.G. Lingala
"Automatic multiple articulator segmentation in dynamic speech MRI using a protocol adaptive stacked transfer learning U-NET model" 
Bioengineering, special issue: AI in MRI: frontiers and applications, 10(5),623, May 2023. 

 

[30]. S. Babu, S.G. Lingala, N. Vaswani
"Fast low-rank column-wise compressive sensing for accelerated dynamic MRI"
IEEE Transactions on Computational Imaging, vol.9, 409-424, Apr 2023.

[29] A.G.O. Neill, E.L. Valdez, S.G. Lingala, A. Pineda

"Modeling human observer detection in undersampled MRI reconstruction with total variation and wavelet sparsity regularization"
Journal of Medical Imaging, 2023, Vol. 10(1), p.015502; doi:10.1117/1.jmi.10.1.015502

[28]. W. Alam, S. Reineke, M.R. Viswanath, R.Z. Rusho, D.V. Daele, J. Liu,  S.G. Lingala
"A flexible 16 channel custom coil array for accelerated imaging of upper and infraglottic airway at 3 Tesla"
Magnetic Resonance in Medicine, 2023 May;89(5):2117-2130.

[27]. D. Meyer, R.Z. Rusho, W. Alam, G.E. Christensen, D.M. Howard, J. Atha, E.A. Hoffman, B. Story, I.R. Titze, S.G. Lingala
"High-resolution three-dimensional hybrid MRI + low dose CT vocal tract modeling: A cadaveric pilot study"
Journal of Voice, 2022, https://doi.org/10.1016/j.jvoice.2022.09.013.

26. A. Pineda, H. Miedema,  S.G. Lingala, K.S. Nayak
"Optimizing constrained reconstruction in magnetic resonance imaging for signal detection"
Physics in Medicine and Biology, 66 (14), 145014, July 2021.

25. Y. Lim, A. Toutios, Y. Bliesener, Y. Tian,  S.G. Lingala, C. Vaz, T. Sorensen, N. Oh, S. Harper, W. Chen, Y. Lee, J. Toger, M. Montesserin, C. Smith, B. Godinez, L. Goldstein, D. Byrd, K.S. Nayak, S. Narayanan
"A multi speaker dataset of raw and reconstructed speech production real-time MRI video and 3D volumetric images"
Scientific Data, Nature, vol. 8, article: 187, 2021.  

24. S.G. Lingala, Y. Zhu, Y. Guo, Y. Bliesener, M. Law, K.S. Nayak
"Tracer kinetic models as temporal constraints during DCE-MRI reconstruction"
Medical Physics, 47(1), 37-51, 2020.  

23. Y. Bliesener, S.G. Lingala, J.P. Haldar, K.S. Nayak
"Impact of (k-t) sampling on DCE-MRI tracer kinetic parameter estimation"
Magnetic Resonance in Medicine, 83(5), 1625-1639, 2020. (https://doi.org/10.1002/mrm.28024)

22. A. Christodoulou, S.G. Lingala
"Accelerated dynamic MRI using learned representations: beyond compressed sensing"
IEEE Signal Processing Magazine, 37(1), 83-93, 2020. 

21. Y. Lim, Y. Zhu, S.G. Lingala, S. Narayanan, K.S. Nayak
"3D Dynamic MRI of the vocal tract during natural speech"
Magnetic Resonance in Medicine, 81(3), 1511-1523, 2019. doi: 10.1002/mrm.27570

20. Y. Lim, S.G. Lingala, S. Narayanan, K.S. Nayak
"Dynamic off resonance correction for spiral real-time MRI of speech"
Magnetic Resonance in Medicine, 81(1), 231-246, 2019. doi: 10.1002/mrm.2737379.

19. Y. Guo, S.G. Lingala, Y. Bliesener, R.M. Lebel, Y. Zhu, K.S. Nayak
"Joint arterial input function and tracer kinetic parameter estimation from under-sampled DCE-MRI using a model consistency constraint"
 Magnetic Resonance in Medicine, 79(5): 2804-2815, May 2018.

18. J. Toger, T. Sorensen, K. Somandepalli, A. Toutios, S.G. Lingala, S. Narayanan, K.S. Nayak
"Test-retest repeatability of human speech biomarkers from static and real-time dynamic magnetic resonance imaging"
Journal of Acoustical Society of America, 141(5): 3323, May 2017. 

17. S.G. Lingala, Y. Zhu, Y. Lim, A. Toutios, Y. Ji, W-C. Lo, N. Seiberlich, S. Narayanan, K.S. Nayak
"Feasibility of spiral through-time GRAPPA for low latency accelerated real-time MRI of speech
Magnetic Resonance in Medicine, early view, Feb 2017, doi: 10.1002/mrm.26611. 

16. Y. Guo, S.G. Lingala, Y. Zhu, R.M. Lebel, K.S. Nayak
"Direct estimation of tracer-kinetic parameter maps from highly undersampled brain DCE-MRI"
Magnetic Resonance in Medicine, early view, Nov 2016, doi: 10.1002/mrm.26540. 
[software]

15. Y. Guo, R.M. Lebel, Y. Zhu, S.G. Lingala, M. Shiroishi, M. Law, K.S. Nayak
"High-resolution whole-brain DCE-MRI using constrained reconstruction: prospective clinical evaluation in brain tumor patients
Medical Physics, 43, 2016, early view: doi: 10.1118/1.4944736.

14. X. Miao, S.G. Lingala, Y. Guo, T. Jao, M. Usman, C. Prieto, K.S. Nayak
"Accelerated cardiac cine MRI using locally low rank and finite difference constraints 
Magnetic Resonance Imaging, vol.34, pp:707-714, March 2016. 
[software]

13. Y. Mohsin, S.G. Lingala, E. DiBella, M. Jacob
"PRICE: Accelerated Dynamic MRI using PatchRegularization for Implicit motion CompEnsation"
Magnetic Resonance in Medicine, early view, April 2016, doi: 10.1002/mrm.26215
[software]

12. S. Bhave, S.G. Lingala, J. Newell, S. Nagle, M. Jacob
"Blind Compressed Sensing Enables 3D Dynamic Free Breating MR Imaging of Lung Volumes and Diaphragm Motion"
Investigative Radiology, Special issue on Advances for Clinical Imaging involving Data Sparsity in MRI and CT, early view, Feb 2016 doi: 10.1097/RLI.0000000000000253 
[software] 

11. Y. Zhu, Y. Guo, S.G. Lingala, R.M. Lebel, M. Law, K.S. Nayak
"GOCART: GOlden angle CArtesian encoded Randomization for Time-resolved 3D MRI
Magnetic Resonance Imaging, vol.34 (7), pp: 940-950, Sep 2016. 
[software] 

10. S.G. Lingala, Y. Zhu, Y.C. Kim, A. Toutios, S. Narayanan, K.S. Nayak
"A fast and flexible MRI system for the dynamic study of vocal tract shaping
Magnetic Resonance in Medicine, early view, Jan 2016, doi: 10.1002/mrm.26090
(associated web page
(open-source International Phonetic Alphabet data-base with the above system)


9. S.G. Lingala, B.P. Sutton, M.E. Miquel, K.S. Nayak
"Recommendations for real-time speech MRI"
Journal of Magnetic Resonance Imaging, vol. 43 (1), pp: 28-44, Jan 2016. 
(supplementary video material).

8. Y. Guo, S.G. Lingala, K.S. Nayak
"Constrained Reconstruction enables clinical Whole Brain DCE-MRI"
SPIE News Room, doi: 10.1117/2.1201507.006016.

7. S.G. Lingala, Y. Zhu, Y-C. Kim, A. Toutios, S. Narayanan, K.S. Nayak
"Towards High Frame Rate Real-Time Magnetic Resonance Imaging of Speech Production"
SPIE News Room, doi: 10.1117/2.1201505.005916.

6. S. Bhave, S.G. Lingala, C.P. Johnson, V.A. Magnotta, M. Jacob
"Accelerated whole-brain multi-parameter mapping using blind compressed sensing
Magnetic Resonance in Medicine, (early view, Apr 2015, doi: 10.1002/mrm.25722)

5. S.G. Lingala, E. DiBella, M. Jacob
"Deformation corrected compressed sensing: a novel framework for accelerated dynamic MRI
IEEE Transactions on Medical Imaging, vol.34(1), pp. 72-85, Jan 2015. 
(supplementary material) [software] 

4. S.G. Lingala, E. DiBella, G. Adluru, M. Jacob
"Accelerated free breathing myocardial perfusion MRI using multi coil radial k-t SLR"
Physics in Medicine and Biology, vol.58(20),pp.7309-7327, Sep 2013.
(supplementary material) [software]

3. S.G. Lingala, M. Jacob
"Blind compressed sensing dynamic MRI"
IEEE Transactions on Medical Imaging, pp 1132-1145, vol.32(6), June 2013.
[software]

2. Y. Hu, S.G. Lingala, M. Jacob
"A fast majorize minimize algorithm for the recovery of sparse and low rank matrices"
IEEE Transactions on Image Processing, pp: 742-753, vol.21(2), Feb 2012.

1. S.G. Lingala, Y. Hu, E. DiBella, M. Jacob
"Accelerated dynamic MRI by exploiting low rank and sparse properties: k-t SLR"
IEEE Transactions on Medical Imaging, (Special Issue on Compressive sensing for Biomedical Imaging), pp: 1042-1054, vol.30, May 2011.
 [software]

 


Conference:

91. R.Z. Rusho, B. Story, D. Meyer, M. Jacob, S.G. Lingala
"Synthesizing speech through a tube talker model informed by dynamic MRI-derived vocal tract area functions"
(oral presentation) annual meeting of the ISMRM, Toronto, June 2023

90. W. Alam, D.V. Daele, J. Liu, S.G. Lingala
"Accelerated 3D dynamic upper-airway MRI in natural sleeping obstructive sleep apnea patients"
(digital poster presentation) annual meeting of the ISMRM, Toronto, June 2023. 

89. S. Erattakulangara, S. Gerard, K. Kelat, K. Burnham, R. Balbi, D. Meyer, S.G. Lingala
"Volumetric vocal tract segmentation using a deep transfer learning 3D U-NET model"
(digital poster presentation), annual meeting of the ISMRM, Toronto, June 2023. 

88. W. Alam*, R.Z. Rusho*, D.V. Daele, J. Liu, M. Jacob, S.G. Lingala; *equal contribution
"Accelerated imaging of airway collapse in obstructive sleep apnea with variable density spirals and variational manifold learning"
ISMRM workshop on data sampling and reconstruction, Sedona, Jan 2023

87. R.Z. Rusho, B. Story, M. Jacob, S.G. Lingala
"Towards high spatio-temporal resolution pseudo-3D dynamic imaging of vocal tract shaping during speech production"
ISMRM workshop on data sampling and reconstruction, Sedona, Jan 2023.

86. A. Pineda, S.G. Lingala
"Task based assessment of image quality for Magnetic Resonance Imaging"
ISMRM workshop on data sampling and reconstruction, Sedona, Jan 2023.

85. R.Z. Rusho, Q. Zou, W. Alam, S. Erattakulangara, M. Jacob, S.G. Lingala
"Accelerated pseudo 3d dynamic speech MRI at 3Tesla using unsupervised deep variational manifold learning"
annual meeting of Medical Imaging and Computer-Assisted Intervention Society (MICCAI), Sep 2022

84. D. Meyer, S.G. Lingala, R.Z. Rusho, S. Erattakulangara, W. Alam, J. Atha, G.E. Christensen, D.M. Howard, E.A. Hoffman, I.R. Titze
"Physical modeling of high-resolution hybrid CT+MRI vocal tract images"
(oral presentation), annual meeting of the Voice Symposium, May 2022. 

83. D. Meyer, S.G. Lingala, J. Atha, D.M. Howard, E.A. Hoffman, I.R. Titze
"Minimal CT dosages necessary for blended CT+MRI vocal tract imaging"
(oral presentation), annual meeting of the Voice Symposium, May 2022. 

82. D. Meyer, S.G. Lingala, R.Z. Rusho, J. Atha, D.M. Howard, E.A. Hoffman, I.R. Titze
"Pilot study - high resolution hybrid CT+MRI vocal tract imaging"
(oral presentation), International Physiology and acoustics of singing conference, May 2022. 

81. S. Erattakulangara, K. Kelat, S.G. Lingala
"Protocol adaptive stacked transfer learning (STL) U-NET with small dataset training for soft tissue segmentation in dynamic speech MRI"
(digital poster presentation), annual meeting of ISMRM, May 2022. 

80. W. AlamS.G. Lingala
"Accelerated volumetric vocal tract MRI using model based deep learning"
(digital poster presentation), annual meeting of ISMRM, May 2022. 

79. R.Z. Rusho, Q. Zou, M. Jacob, S.G. Lingala
"Joint recovery of time aligned multi-slice dynamic speech MR images from under-sampled data using a deep generative manifold model"
(digital poster presentation), annual meeting of ISMRM, May 2022. 

78. A.O. Neil, T. M. Kemp, S.G. Lingala, A. Pineda
"Evaluation of multi coil SENSE reconstruction of undersampled data using a human observer model of signal detection"
(digital poster presentation), annual meeting of ISMRM, May 2022. 

77. J. Herman, M. Wong, S.G. Lingala, A. Pineda
"Evaluation of neural network reconstruction of undersampled data using a human observer model of signal detection"
(Online Gather.town power pitch presentation), annual meeting of ISMRM, May 2022. 

76. S. Babu, S. Nayer, S.G. Lingala, N. Vaswani
"Fast low rank compressive sensing for accelerated dynamic MRI"
annual meeting of IEEE-ICASSP, May 2022. 

75. A.G.O. Neill, S.G. Lingala, A.R. Pineda
"Predicting human detection performance in magnetic resonance imaging (MRI) with total variation and wavelet sparsity regularizers"
annual meeting of SPIE, Feb 2022. 

74. W. AlamR.Z. Rusho, S. Reineke, M. Raja, S. Kruger, J.M. Reinhardt, J. Liu, D.V.Daele, S.G. Lingala
"A novel 16 channel flexible coil for highly accelerated upper-airway MRI"
(digital poster presentation), annual meeting of ISMRM, May 2021. 

73. R.Z. RushoW. Alam, A. Ahmed, S. Kruger, M. Jacob, S.G. Lingala
"Rapid dynamic speech imaging at 3T using combination of a custom airway coil, variable density spirals, and manifold regularization"
(oral presentation), annual meeting of ISMRM, May 2021
Recipient of an ISMRM summa cum laude merit award
(oral presentation), annual meeting of ISMRM, May 2021

72. S. ErattakulangaraK. Kelat, J. Liu, S.G. Lingala
"Stacked hybrid learning U-NET for segmentation of multiple articulators in speech MRI"
(digital poster presentation), annual meeting of ISMRM, May 2021

71. J.D. Herman, R.E. Roca, A.G.O. Neill, S.G. Lingala, A.R. Pineda
"Task based assessment for neural networks: evaluating undersampled MRI reconstructions based on signal detection"
(digital poster presentation), annual meeting of ISMRM, May 2021

70. R.E. Roca, J.D. Herman, A.G.O. Neill, S.G. Lingala, A.R. Pineda
"Task performance or artifact reduction? Evaluating the number of channels and dropout based on signal detection on a U-NET with SSIM loss"
(digital poster presentation), annual meeting of ISMRM, May 2021

69. A.G. O'Neill, E.L. Valdez, S.G. Lingala, A.R. Pineda
"Modeling human observer detection in undersampled magnetic resonance imaging (MRI)"
(oral presentation), annual meeting of SPIE Medical Imaging, Sandiego, Feb 2021
Finalist, Student paper award in the SPIE conference on "Image perception, observer performance, and technology assessment".

68. S. Erattakulangara, K. KelatS.G. Lingala
"Knowledge-net (K-net): a transfer learning network for detection of Covid-19 from chest X-ray images"
annual meeting of Biomedical Engineering Society (BMES), 2020

67. S. ErattakulangaraS.G. Lingala
"U-net based segmentation of the airway in dynamic speech MRI"
28th Annual meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), 2020. (digital poster presentation) 

66. J. KettelkampS.G. Lingala
"Arterial input function and tracer kinetic model driven network for rapid inference of kinetic maps in DCE-MRI (AIF-TK-net)"
IEEE-International Symposium on Biomedical Imaging, 2020. 

65. S. ErattakulangaraS.G. Lingala
"Airway segmentation in speech MRI using the U-net architecture"
IEEE-International Symposium on Biomedical Imaging, 2020. 

64. N.Rajulapati, J. Reinhardt, D. Van Daele, S.G. Lingala
"Feasibility of fast dynamic MRI as a tool to investigate swallowing"
annual meeting of the Biomedical Engineering Society, 2019.  
(poster presentation)

63. D. Meyer. S.G. Lingala, D.M. Howard
"Seeing voice: visualization of vocal tract shaping with magnetic resonance imaging (MRI)"
48th annual symposium of the Voice Foundation, 2019.  
(oral presentation)

62. S.G. Lingala, D. Blake, S. Kruger, D. Meyer, E. Finnegan, I. Titze, E. Hoffman 
"Fast dynamic speech MRI at 3 Tesla using variable density spirals and constrained reconstruction"
Proceedings of the 27th International Society of Magnetic Resonance in Medicine (ISMRM), 2019. 
(digital poster presentation) 

61. S.G. Lingala, Y. Lim, S. Kruger, K.S. Nayak 
"Improved spiral dynamic MRI of vocal tract shaping at 3 Tesla using dynamic off resonance artifact correction"
Proceedings of the 27th International Society of Magnetic Resonance in Medicine (ISMRM), 2019. 
(oral presentation)

60. Y. Bliesener, S.G. Lingala, J.P. Haldar, K.S. Nayak
"Influence of whole-braince DCE-MRI (k,t) sampling strategies on variance of pharmaco-kinetic parameter estimates"
Proceedings of the 26th International Society of Magnetic Resonance in Medicine (ISMRM), 2018. 
(power-pitch presentation)

59. Y. Lim, Y. Zhu, S.G. Lingala, D. Byrd, S. Narayanan, K.S. Nayak
"3D Real time MRI of vocal tract shaping"
Proceedings of the 26th International Society of Magnetic Resonance in Medicine (ISMRM), 2018. 
(e-poster presentation)

58. S.G. Lingala, Y. Guo, N. Nallapareddy, Y. Bliesener, R. Marc Lebel, K.S. Nayak
"Nested tracer-kinetic model-based DCE-MRI reconstruction from under-sampled data"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(poster presentation)

57. Y. Guo, S.G. Lingala, R. Marc Lebel, K.S. Nayak
"Joint estimation of arterial input function and tracer kinetic parameters from under-sampled data"
Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(power-pitch presentation)
Recipient of an ISMRM Magna Cum Laude merit award.

56. Y. Guo, S.G. Lingala, K.S. Nayak
"Reconstruction of DCE tracer kinetic parameters from under-sampled data with a flexible model consistency constraint"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(oral presentation)      

55. Y. Bliesener, S.G. Lingala, J.P. Haldar, K.S. Nayak
"Comparison of (k,t) sampling schemes for DCE-MRI pharmaco-kinetic parameter estimation"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(poster presentation)

54. Y. Lim, S.G. Lingala, S. Narayanan, K.S. Nayak
"Correction of dynamic off-resonance in spiral 2D real-time MRI of speech"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(e-poster presentation)                                                           

53. J. Chen, S.G. Lingala, Y. Lim, A. Toutios, S. Narayanan, K.S. Nayak
"Task-based Optimization of Regularization in highly accelerated speech RT-MRI"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.
(e-poster presentation)
 Animation of the day - featured on ISMRM's highlights page

52. R. Marc Lebel, Y. Guo, S.G. Lingala, R. Frayne, K.S. Nayak
"Highly accelerated DCE imaging with integrated T1 mapping"
 Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017. 
(power-pitch presentation) 

51. J. Toger, T. Sorensen, K. Somandepalli, A. Toutios, S.G. Lingala, S. Narayanan, K.S. Nayak
"Test-retest repeatability of human speech biomarkers from static and real-time dynamic magnetic resonance imaging"
Proceedings of 25th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2017.

50. R.M. Lebel, N. Nallapareddy, S.G. Lingala, L.B. Andersen, R. Frayne, K.S. Nayak
"Automatic bolus detection for dynamic contrast enhanced imaging with sparse sampling"
Society of Magnetic Resonance Angiography, p. 76, (2016). 

49. S.G. Lingala, A. Toutios, J. Toger, Y. Lim, Y. Zhu, Y-C. Kim, C. Vaz, S. Narayanan, K.S. Nayak
"State of the art MRI protocol for comprehensive assessment of vocal tract structure and function"
 Proceedings of Interspeech, San Francisco, 2016.
(oral presentation)

48. A. Toutios, S.G. Lingala, C. Vaz, J. Kim, J. Esling, P. Keating, M. Gordon, L. Goldstein, K.S. Nayak, S. Narayanan
"Illustrating the production of the International Phonetic Alphabet Sounds using fast real-time magnetic resonance imaging"
 Proceedings of Interspeech, San Francisco, 2016.
(oral presentation)

47. Y. Lim, S.G. Lingala, A. Toutios, S. Narayanan, K.S. Nayak
"Improved depiction of tissue bundaries in vocal tract real-time MRI using automatic off-resonance correction"
 Proceedings of Interspeech, San Francisco, 2016.
(poster presentation)

46. J. Toger, Y. Lim, S.G. Lingala, S. Narayanan, K.S. Nayak
"Sensitivity of quantitative real-time MRI metrics of vocal tract dynamics to image reconstruction settings"
 Proceedings of Interspeech, San Francisco, 2016.
(oral presentation)

45. A. Kammen,  B. Mordkin, S. Cen, S.G. Lingala, M. Law, K.S. Nayak
"High resolution DCE-MRI permeability differentiates pseudoprogression from true disease progression in primary high-grade gliomas and metastatic melanoma"
 ASNR (American Society of Neuroradiology) 54th Annual meeting, Washington, May 2016.

44. A. Kammen, B. Morkin, S. Cen, S.G. Lingala, J. Arevalo-Perez, A. Thomas, K. Peck, T. Kaley, M. Law, R. Young, K.S. Nayak
"Multi-center study demonstrates dynamic contrast enhanced permeability MRI differentiates pseudo progression from true progression in primary high-grade gliomas and metastatic melanoma"
 ASNR (American Society of Neuroradiology) 54th Annual meeting, Washington, May 2016.

43. S.G. Lingala, Y. Guo, Y. Zhu, N. Nallapareddy, R.M. Lebel, K.S. Nayak
"Accelerated brain DCE-MRI using contrast agent kinetic models as temporal constraints"
Proceedings of 24th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2016.
(oral presentation)

42. S.G. Lingala,  S. Bhave, Y. Zhu, K.S. Nayak, M. Jacob
"Temporal point spread function interpretation of low-rank, dictionary learning models in dynamic MRI"
Proceedings of 24th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2016.
(e-poster presentation)

41. S.G. Lingala, Y. Zhu, Y. Ji, A. Toutios, W-C Lo, N. Seiberlich, S. Narayanan, K.S. Nayak
"Accelerating Real-time MRI of speech using spiral through-time GRAPPA"
Proceedings of 24th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2016.
(e-poster presentation)

40. Y. Guo, S.G. Lingala, Y. Zhu, R.M. Lebel, K.S. Nayak
"Direct reconstruction of kinetic parameter maps in accelerated brain DCE-MRI using the Extended-Tofts model"
Proceedings of 24th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2016.
(oral presentation)

39. S. Bhave, S.G. Lingala, J.D. Newell, S. Nagle, M. Jacob
"Clinical evaluation of respiratory mechanics using accelerated 3D dynamic free breathing MRI reconstruction"
 Proceedings of 24th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2016. Recipient of an ISMRM Summa Cum Laude merit award. 
(oral presentation)
Recipient of an ISMRM Summa Cum Laude merit award.

38. S.G. Lingala, Y. Mohsin, S. Bhave, X. Miao, Y. Guo, K.S. Nayak, E. DiBella, M. Jacob
"Data-driven adaptive reconstruction algorithms for accelerated dynamic MRI: an open source MATLAB package"
 ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona, Arizona, Jan 2016. (poster).

37. S.G. Lingala, Y. Guo, Y. Zhu, N. Nallapareddy, R.M. Lebel, M. Law, K.S. Nayak
"Accelerated brain DCE-MRI using Contrast Agent Kinetic Models as Temporal Constraints".
ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona, Arizona, Jan 2016. 
(oral presentation link)-requires ISMRM username/password

36. Y. Guo, Y. Zhu, S.G. Lingala, R.M. Lebel, K.S. Nayak
"Direct Reconstruction of Tracer-Kinetic Parameter Maps from Prospective Highly Under-sampled DCE-MRI". 
ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona, Arizona, Jan 2016.
(oral presentation link)-requires ISMRM username/password

35. K.S. Nayak, Y. Guo, Y. Zhu, S.G. Lingala, R.M. Lebel, N. Nallapareddy, M.S. Shiroishi, M. Law
"Improved clinical DCE-MRI pipeline for high resolution, whole brain imaging: application to brain tumor patients." 
 Radiological Society of North America (RSNA), 2015, Chicago. (slides

34. S.G. Lingala, Y. Guo, Y. Zhu, S. Barnes, R.M. Lebel, K.S. Nayak
"Accelerated DCE MRI using constrained reconstruction based on pharmaco-kinetic model dictionaries
Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 0196. 
(oral presentation link)-requires ISMRM username/password
Recipient of an ISMRM Magna cum Laude merit award

33. S.G. Lingala, Y. Zhu, Y-C Kim, A. Toutios, S. Narayanan, K.S. Nayak
"High spatio-temporal resolution multi-slice real time MRI of speech using golden angle spiral imaging with constrained reconstruction, parallel imaging, and a novel upper airway coil", 
 Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 689
(oral presentation link)-requires ISMRM username/password
 Recipient of an ISMRM Magna cum Laude Merit Award.

32. Y. Zhu, Y. Guo, S.G. Lingala, R.M. Lebel, M. Law, K.S. Nayak
"Evaluation of GLACIER 3DFT phase encode order for DCE-MRI"
Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 3069.

31. Y. Zhu, Y. Guo, S.G. Lingala, S. Barnes, R.M. Lebel, M. Law, K.S. Nayak
"Evaluation of DCE-MRI data sampling, reconstruction and model fitting using digital brain phantom"
Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 3052.
(e-poster link)-requires ISMRM username/password

30. R.M. Lebel, Y. Guo, Y. Zhu, S.G. Lingala, R. Frayne, L.B. Andersen, J. Easaw, K.S. Nayak
 "The Comprehensive Contrast-enhanced Neurovascular Exam"
Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 3705.
(e-poster link)-requires ISMRM username/password

29. Y. Guo, Y. Zhu, S.G. Lingala, R.M. Lebel, K.S. Nayak
"Highly Accelerated Brain DCE MRI with Direct Estimation of Pharmacokinetic Parameter Maps"
Proceesings of 23rd International Society of Magnetic Resonance in Medicine (ISMRMScientific Sessions, 2015, pp. 1093. 
(oral presentation link)-requires ISMRM username/password
 Recipient of an ISMRM Summa cum Laude Merit Award.

28. X.Miao, S.G. Lingala, Y. Guo, T. Jao, K.S. Nayak
"Accelerated cardiac cine MRI using Locally Low rank and Total variation Constraints
Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 920. 
(oral presentation link)-requires ISMRM username/password
Recipient of an ISMRM Magna cum Laude Merit Award.

27. Y.Q. Mohsin, S.G. Lingala, E. DiBella, M. Jacob
 "Motion Compensated Free Breathing Myocardial Perfusion MRI Using Iterative Non Local Shrinkage"
 Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 6308.

26. S. Bhave, S.G. Lingala, C.P. Johnson, V.A. Magnotta, M. Jacob
 "Whole Brain multi-parameter mapping using dictionary learning"
 Proceedings of 23rd International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 5936.

25. S. Bhave, S.G. Lingala, J. Newell, A. Comellas, M. Jacob
 "Dynamic 3D MRI Of the whole Lung using Constrained Reconstruction with learned dictionaries"
 Proceedings of International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Sessions, 2015, pp. 5979.

24. S. Bhave, S.G. Lingala, M. Jacob
 "A variable splitting based algorithm for Fast multi-coil Blind compressed sensing MRI reconstruction"
 IEEE International conference of the IEEE Engineering in Medicine and Biology Society (IEEE-EMBS), Chicago, Aug 2014.
 Finalist, EMBS 2014 Student Paper Competition

23. Y. Mohsin, Z. Yang, S.G. Lingala, M. Jacob
 "Motion compensated dynamic imaging without explicit motion estimation"
 ISMRM, Milan, Italy, 2014. 

22. S.G. Lingala, Y. Mohsin, J. Newell, J. Sieren, D. Wang, D. Thedens, M. Jacob
 "Towards 3D dynamic MRI of the lung using blind compressed sensing"
ISMRM, Milan, Italy, 2014. 
(oral presentation link)-requires ISMRM username/password
Recipient of an ISMRM Magna cum Laude Merit Award. 

21. S. Poddar, S.G. Lingala, M. Jacob
"Real Time Cardiac MRI using Manifold Sensing
ISMRM, Milan, Italy, 2014.
(poster link)-requires ISMRM username/password

20. S. Poddar, S.G. Lingala, M. Jacob
 "Joint recovery of undersampled signals on a manifold: application to free breathing cardiac MRI"
ICASSP, Florence, Italy, 2014
Best student paper award in the category of Bio Imaging and Signal processing. 

19. S.G. Lingala, E. DiBella, M. Jacob
"A generalized motion compensated compressed sensing scheme for highly accelerated myocardial perfusion MRI"
Society for Cardiac Magnetic Resonance (SCMR)-ISMRM workshop on Accelerated CMR: Towards Comprehensive Clinical Cardiovascular Imaging, 2014.

18. S.G. Lingala, Y. Mohsin, J. Newell, J. Sieren, D. Thedens, P. Kollasch, M. Jacob
 "Accelerated dynamic imaging of the lung using blind compressive sensing"
Society for Cardiac Magnetic Resonance (SCMR)-ISMRM workshop on Accelerated CMR: Towards Comprehensive Clinical Cardiovascular Imaging, 2014.

17. S.G. Lingala, M. Jacob
"Accelerated dynamic MRI using sparse dictionary learning"
SPIE, 2013. 

16. S.G. Lingala, E. DiBella, M. Jacob
"Accelerated myocardial perfusion MRI using motion compensated compressed sensing (MC-CS)"
International Society for Magnetic Resonance in Medicine (ISMRM), 2013.
(poster link)-requires ISMRM username/password

15. S.G. Lingala, M. Jacob
"Blind compressive sensing dynamic MRI with sparse dictionaries"
International Society for Magnetic Resonance in Medicine (ISMRM), 2013.
(e-poster link)-requires ISMRM username/password

14. S.G. Lingala, M. Jacob
"Blind compressed sensing with sparse dictionaries for accelerated dynamic MRI
IEEE International Symposia on Biomedical Imaging (IEEE-ISBI), 2013.

13. S.G. Lingala, M. Jacob
"A blind compressive sensing frame-work for accelerated dynamic MRI"
IEEE International Symposia on Biomedical Imaging (IEEE-ISBI), 2012.

12. S.G. Lingala, M. Jacob
"Blind compressed sensing dynamic MRI"
International Society for Magnetic Resonance in Medicine (ISMRM), 2012. 
(oral presentation link)-requires ISMRM username/password
Recipient of an ISMRM Magna Cum Laude Merit award.

11. S.G. Lingala, E. DiBella, M. Nadar, C. Chefd'hotel, M. Jacob
"Motion compensated reconstruction for myocardial perfusion MRI
Society for Cardiac Magnetic Resonance (SCMR), 2012.

10. S.G. Lingala, E. DiBella, M. Jacob
"Accelerated imaging of rest and stress myocardial perfusion imaging using multi-coil k-t SLR"
Society for Cardiac Magnetic Resonance (SCMR), 2012.

9. S.G. Lingala, Y. Hu, M. Jacob
"Blind linear models for the recovery of dynamic MRI data",
IV conference on Wavelets and Sparsity, SPIE, Aug 2011.

8. S.G. Lingala, Y. Hu, E. DiBella, M. Jacob
"Highly accelerated myocardial perfusion MRI using k-t SLR with parallel imaging"
International Society for Magnetic Resonance in Medicine (ISMRM), 2011.
[poster: pdf]

7. Y. Hu, S.G. Lingala, M. Jacob
"High resolution structural free breathing cardiac MRI enabled by k-t SLR"
International Society for Magnetic Resonance in Medicine (ISMRM) 2011.
(e-poster link)-requires ISMRM username/password

6. S.G. Lingala, Y. Hu, E. DiBella, M. Jacob
"Accelerated first pass cardiac perfusion MRI using improved k-t SLR"
IEEE International Symposia on Biomedical Imaging (IEEE-ISBI), 2011.

5. S.G. Lingala, M. Nadar, C. Chefd'hotel, L. Zhang, M. Jacob
"Unified reconstruction and motion estimation in first pass cardiac perfusion imaging"
IEEE International Symposia on Biomedical Imaging (IEEE-ISBI), 2011.

4. S.G. Lingala, M. Jacob
"Free breathing cardiac perfusion MRI reconstruction using a sparse and low rank model: Validation with the Physiologically Improved NCAT phantom"
IEEE International conference on Communications and Signal Processing (IEEE-ICCSP), 2011. 

3. S.G. Lingala, Y. Hu, M. Jacob
"Real time cardiac MRI using low rank and sparsity penalties"
IEEE International symposium on Biomedical Imaging (IEEE-ISBI), 2010.

2. R.K. Bhatt, S.G. Lingala, A. Deshmukh, V. Gadre
"Quantification of cardiac motion in cardiac magnetic resonance imaging"
International Conference on Sensors, Signal processing, Communication, Control, and Instrumentation (SSPCCIN), Jan 2008.

1. B. Errangi, S.G. Lingala
"Diffusion tensor magnetic resonance imaging"
IEEE North east bioengineering conference, pp. 67-68, 2006.


Patent:

1. S.G. Lingala, M. Jacob, C. Chefd’hotel, M. Nadar, L. Zhang
Unifying Reconstruction and Motion Estimation in First Pass Cardiac Perfusion MR Imaging” 
(United States Patent Application 20120148128), June 2012.

2. K.S. Nayak, Y. Guo, R. M. Lebel, Y. Zhu, S.G. Lingala
"Method for improved DCE imaging using tracer kinetic models as constraints"
United States Application number: 15/595156,  Nov 2017. 

3. S.G. Lingala, B. Mailhe, N. Janardhanan, J. Das, R. Grimm, D. Marcel Nickel, M. Nadar
Streak artifact reduction in magnetic resonance imaging
United States Application number: 2019/0346518 A1, Nov 14 2019.  


Presentations:

 
1. S.G. Lingala
Motion compensated image reconstruction
Educational talk in the course on Image Reconstruction
Annual meeting of the International Society of Magnetic Resonance in Medicine (ISMRM) 2017, Hawaii.
[slides (pptx)] [pdf slides: animations donot play]
 
2. S.G. Lingala
"Constrained Reconstruction enables novel translational applications in multi-dimensional MRI"
Iowa Institute of Biomedical Imaging seminar, University of Iowa, June 2016.
 
3. S.G. Lingala
Real time speech MRI in multiple planes using golden angle spirals and temporal regularization
Wavelets and Sparsity XVI, SPIE, (invited talk) San Diego, 2015.
 
4. S.G. Lingala
"Low rank, sparsity, and beyond: New reconstruction algorithms for  highly accelerated dynamic MRI"
Indian Institute of Technology Hyderabad (invited talk), Aug 2014. 
  

Book Chapter:

1. S.G. Lingala, M. Jacob
"Accelerated Dynamic MRI using adaptive signal models"
(Book Chapter), MRI: Physics, Image Reconstruction, and AnalysisCRC Press 2015.